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FROM ubuntu:16.04
MAINTAINER Suren A. Chilingaryan <csa@suren.me>
# Install Devel & Python
RUN apt-get update -qq \
&& apt-get install --no-install-recommends -y \
gcc git pkg-config netcat \
telnet iputils-ping dnsutils \
python python-dev python-pip python-setuptools python-virtualenv python-wheel python-numpy python-scipy python-h5py python-yaml python-pydot python-matplotlib libopenblas-base \
mysql-client libmysqlclient-dev
# upgrade pip
RUN pip --no-cache-dir install --upgrade pip
# install dependencies from python packages
RUN pip --no-cache-dir install \
setuptools==39.1.0 numpy==1.14.5 tifffile==0.14.0 SimpleParse==2.1.1 redis==2.10.6 rq==0.12 \
scipy weave scikit-image opencv-python h5py pydicom Pillow django MySQL
COPY *-entrypoint.sh /
COPY run*.sh /
ENTRYPOINT ["/docker-entrypoint.sh"]
CMD ["/run.sh"]
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