From b2fc6c70434674d74551c3a6c01ffb3233499312 Mon Sep 17 00:00:00 2001 From: Willem Jan Palenstijn Date: Mon, 1 Jul 2013 22:34:11 +0000 Subject: Update version to 1.3 --- .../astra/ParallelBeamBlobKernelProjector2D.inl | 212 +++++++++++++++++++++ 1 file changed, 212 insertions(+) create mode 100644 include/astra/ParallelBeamBlobKernelProjector2D.inl (limited to 'include/astra/ParallelBeamBlobKernelProjector2D.inl') diff --git a/include/astra/ParallelBeamBlobKernelProjector2D.inl b/include/astra/ParallelBeamBlobKernelProjector2D.inl new file mode 100644 index 0000000..70764b1 --- /dev/null +++ b/include/astra/ParallelBeamBlobKernelProjector2D.inl @@ -0,0 +1,212 @@ +/* +----------------------------------------------------------------------- +Copyright 2012 iMinds-Vision Lab, University of Antwerp + +Contact: astra@ua.ac.be +Website: http://astra.ua.ac.be + + +This file is part of the +All Scale Tomographic Reconstruction Antwerp Toolbox ("ASTRA Toolbox"). + +The ASTRA Toolbox is free software: you can redistribute it and/or modify +it under the terms of the GNU General Public License as published by +the Free Software Foundation, either version 3 of the License, or +(at your option) any later version. + +The ASTRA Toolbox is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU General Public License for more details. + +You should have received a copy of the GNU General Public License +along with the ASTRA Toolbox. If not, see . + +----------------------------------------------------------------------- +$Id$ +*/ + + + +//---------------------------------------------------------------------------------------- +// PROJECT ALL +template +void CParallelBeamBlobKernelProjector2D::project(Policy& p) +{ + for (int iAngle = 0; iAngle < m_pProjectionGeometry->getProjectionAngleCount(); ++iAngle) { + for (int iDetector = 0; iDetector < m_pProjectionGeometry->getDetectorCount(); ++iDetector) { + projectSingleRay(iAngle, iDetector, p); + } + } +} + + +//---------------------------------------------------------------------------------------- +// PROJECT SINGLE PROJECTION +template +void CParallelBeamBlobKernelProjector2D::projectSingleProjection(int _iProjection, Policy& p) +{ + for (int iDetector = 0; iDetector < m_pProjectionGeometry->getDetectorCount(); ++iDetector) { + projectSingleRay(_iProjection, iDetector, p); + } +} + + + +//---------------------------------------------------------------------------------------- +// PROJECT SINGLE RAY +template +void CParallelBeamBlobKernelProjector2D::projectSingleRay(int _iProjection, int _iDetector, Policy& p) +{ + ASTRA_ASSERT(m_bIsInitialized); + + int iRayIndex = _iProjection * m_pProjectionGeometry->getDetectorCount() + _iDetector; + + // POLICY: RAY PRIOR + if (!p.rayPrior(iRayIndex)) return; + + // get values + float32 t = m_pProjectionGeometry->indexToDetectorOffset(_iDetector); + float32 theta = m_pProjectionGeometry->getProjectionAngle(_iProjection); + if (theta >= 7*PIdiv4) theta -= 2*PI; + + bool flip = false; + + if (theta >= 3*PIdiv4) { + theta -= PI; + t = -t; + flip = true; + } + + + if (theta <= PIdiv4) { // -pi/4 <= theta <= pi/4 + + // precalculate sin, cos, 1/cos + float32 sin_theta = sin(theta); + float32 cos_theta = cos(theta); + float32 inv_cos_theta = 1.0f / cos_theta; + + // precalculate other stuff + float32 lengthPerRow = m_pVolumeGeometry->getPixelLengthY() * inv_cos_theta; + float32 updatePerRow = sin_theta * lengthPerRow; + float32 inv_pixelLengthX = 1.0f / m_pVolumeGeometry->getPixelLengthX(); + float32 pixelLengthX_over_blobSize = m_pVolumeGeometry->getPixelLengthX() / m_fBlobSize; + + // some variables + int row, col, xmin, xmax; + float32 P, x, d; + + // calculate P and x for row 0 + P = (t - sin_theta * m_pVolumeGeometry->pixelRowToCenterY(0)) * inv_cos_theta; + x = (P - m_pVolumeGeometry->getWindowMinX()) * inv_pixelLengthX - 0.5f; + + // for each row + for (row = 0; row < m_pVolumeGeometry->getGridRowCount(); ++row) { + + // calculate extent + xmin = (int)ceil((P - m_fBlobSize - m_pVolumeGeometry->getWindowMinX()) * inv_pixelLengthX - 0.5f); + xmax = (int)floor((P + m_fBlobSize - m_pVolumeGeometry->getWindowMinX()) * inv_pixelLengthX - 0.5f); + + // add pixels + for (col = xmin; col <= xmax; col++) { + if (col >= 0 && col < m_pVolumeGeometry->getGridColCount()) { + //d = abs(x - col) * pixelLengthX_over_blobSize; + //index = (int)(d*m_iBlobSampleCount+0.5f); + //float32 fWeight = m_pfBlobValues[min(index,m_iBlobSampleCount-1)] * lengthPerRow; + + float32 fWeight; + int index; + if ((x >= col) ^ flip) { + d = abs(x - col) * pixelLengthX_over_blobSize * cos_theta; + index = (int)(d*m_iBlobSampleCount+0.5f); + fWeight = m_pfBlobValues[min(index,m_iBlobSampleCount-1)]; + } else { + d = abs(x - col) * pixelLengthX_over_blobSize * cos_theta; + index = (int)(d*m_iBlobSampleCount+0.5f); + fWeight = m_pfBlobValuesNeg[min(index,m_iBlobSampleCount-1)]; + } + + int iVolumeIndex = m_pVolumeGeometry->pixelRowColToIndex(row, col); + // POLICY: PIXEL PRIOR + ADD + POSTERIOR + if (p.pixelPrior(iVolumeIndex)) { + p.addWeight(iRayIndex, iVolumeIndex, fWeight); + p.pixelPosterior(iVolumeIndex); + } + } + } + + // update P and x + P += updatePerRow; + x += updatePerRow * inv_pixelLengthX; + } + + } else { // pi/4 < theta < 3pi/4 + + // precalculate sin cos + float32 sin_90_theta = sin(PIdiv2-theta); + float32 cos_90_theta = cos(PIdiv2-theta); + float32 inv_cos_90_theta = 1.0f / cos_90_theta; + + // precalculate other stuff + float32 lengthPerCol = m_pVolumeGeometry->getPixelLengthX() * inv_cos_90_theta; + float32 updatePerCol = sin_90_theta * lengthPerCol; + float32 inv_pixelLengthY = 1.0f / m_pVolumeGeometry->getPixelLengthY(); + float32 pixelLengthY_over_blobSize = m_pVolumeGeometry->getPixelLengthY() / m_fBlobSize; + + // some variables + int row, col, xmin, xmax; + float32 P,x, d; + + // calculate P and x for col 0 + P = (sin_90_theta * m_pVolumeGeometry->pixelColToCenterX(0) - t) * inv_cos_90_theta; + x = (P - m_pVolumeGeometry->getWindowMinY()) * inv_pixelLengthY - 0.5f; + + // for each col + for (col = 0; col < m_pVolumeGeometry->getGridColCount(); ++col) { + + // calculate extent + xmin = (int)ceil((P - m_fBlobSize - m_pVolumeGeometry->getWindowMinY()) * inv_pixelLengthY - 0.5f); + xmax = (int)floor((P + m_fBlobSize - m_pVolumeGeometry->getWindowMinY()) * inv_pixelLengthY - 0.5f); + + // add pixels + for (row = xmin; row <= xmax; row++) { + if (row >= 0 && row < m_pVolumeGeometry->getGridRowCount()) { + //d = abs(x - row) * pixelLengthY_over_blobSize; + //int index = (int)(d*m_iBlobSampleCount+0.5f); + //float32 fWeight = m_pfBlobValues[min(index,m_iBlobSampleCount-1)] * lengthPerCol; + + float32 fWeight; + int index; + if ((x <= row) ^ flip) { + d = abs(x - row) * pixelLengthY_over_blobSize * cos_90_theta; + index = (int)(d*m_iBlobSampleCount+0.5f); + fWeight = m_pfBlobValues[min(index,m_iBlobSampleCount-1)]; + } else { + d = abs(x - row) * pixelLengthY_over_blobSize * cos_90_theta; + index = (int)(d*m_iBlobSampleCount+0.5f); + fWeight = m_pfBlobValuesNeg[min(index,m_iBlobSampleCount-1)]; + } + + + int iVolumeIndex = m_pVolumeGeometry->pixelRowColToIndex(row, col); + // POLICY: PIXEL PRIOR + ADD + POSTERIOR + if (p.pixelPrior(iVolumeIndex)) { + p.addWeight(iRayIndex, iVolumeIndex, fWeight); + p.pixelPosterior(iVolumeIndex); + } + } + } + + // update P and x + P += updatePerCol; + x += updatePerCol * inv_pixelLengthY; + } + + } + + // POLICY: RAY POSTERIOR + p.rayPosterior(iRayIndex); + + + +} -- cgit v1.2.3