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* Fix Python OpTomo for scipy 0.16Daniel M. Pelt2015-07-301-1/+9
| | | | | | scipy 0.16 also uses .T to define a transpose, which conflicts with the old OpTomo implementation. OpTomo now also defines the _transpose() method, which .T will call in scipy 0.16.
* Merge pull request #84 from dmpelt/log-highlevel-fixWillem Jan Palenstijn2015-07-173-9/+9
|\ | | | | Fix formatting when passing strings to log from high-level code
| * Fix formatting when passing strings to log from high-level codeDaniel M. Pelt2015-07-173-9/+9
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* Merge pull request #75 from wjp/cuda_optionsWillem Jan Palenstijn2015-06-2614-73/+197
|\ | | | | Move supersampling options from Algorithm to CudaProjector
| * Update sampleWillem Jan Palenstijn2015-06-231-18/+10
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| * Use supersampling options from CudaProjector2DWillem Jan Palenstijn2015-06-233-36/+73
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| * Use supersampling options from CudaProjector3DWillem Jan Palenstijn2015-06-046-18/+88
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| * Add supersampling options to Cuda ProjectorsWillem Jan Palenstijn2015-05-224-1/+26
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* | Merge pull request #76 from dmpelt/projector-configuration-fixWillem Jan Palenstijn2015-06-267-11/+42
|\ \ | | | | | | Configuration fixes
| * | Fix memory leak in configuration codeDaniel M. Pelt2015-06-254-9/+28
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| * | Add extra null check for ExtraDetectorOffsetDaniel M. Pelt2015-06-251-3/+5
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| * | Include ExtraDetectorOffset in returned configurationDaniel M. Pelt2015-06-241-0/+3
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| * | Fix config to struct/dict translation for array optionsDaniel M. Pelt2015-06-242-2/+9
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* | Add some common temporary file patterns to .gitignore.Willem Jan Palenstijn2015-06-231-22/+30
| | | | | | | | Also add leading slashes to full paths for consistency.
* | Merge pull request #74 from dmpelt/small-fixesWillem Jan Palenstijn2015-06-234-5/+28
|\ \ | | | | | | Small fixes
| * | Additional module name fix in documentationDaniel M. Pelt2015-06-221-1/+1
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| * | Add a .gitignore to ignore build filesDaniel M. Pelt2015-06-201-0/+23
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| * | Actually use the rec_type argument in astra_create_reconstruction_cudaDaniel M. Pelt2015-06-201-1/+1
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| * | Fix matlab compilation without CUDADaniel M. Pelt2015-06-201-2/+2
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| * | Fix wrong module name in documentationDaniel M. Pelt2015-06-201-1/+1
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* | | Don't take address of temporary.Valerii Sokolov2015-06-221-2/+4
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* | Increment version to 1.6Willem Jan Palenstijn2015-05-292-3/+3
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* | Fix vs2008 buildWillem Jan Palenstijn2015-05-292-10/+19
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* | Update utility filesWillem Jan Palenstijn2015-05-293-287/+438
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* | Update README, NEWSWillem Jan Palenstijn2015-05-294-4/+16
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* | Fix optomo reconstruction for 1D inputDaniel M. Pelt2015-05-261-1/+1
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* | Merge pull request #65 from dmpelt/cython-char-fixWillem Jan Palenstijn2015-05-261-7/+14
|\ \ | | | | | | Hold reference to results of six.b calls
| * | Hold reference to results of six.b callsDaan Pelt2015-05-181-7/+14
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* | | Merge pull request #66 from dmpelt/fix-old-sixWillem Jan Palenstijn2015-05-263-3/+18
|\ \ \ | | | | | | | | Fix range import for old six versions
| * | | Fix range import for old six versionsDaniel M. Pelt2015-05-183-3/+18
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* | | | Fix Python samples for updated interface and old six versionsDaniel M. Pelt2015-05-262-4/+12
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* | | Add note about autogen.shWillem Jan Palenstijn2015-05-202-0/+2
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* | Merge pull request #63 from wjp/optomo_sampleWillem Jan Palenstijn2015-05-151-0/+61
|\ \ | | | | | | Create python sample for OpTomo
| * | Create python sample for OpTomoWillem Jan Palenstijn2015-05-151-0/+61
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* | | Merge pull request #49 from 3cHeLoN/astra-spotWillem Jan Palenstijn2015-05-153-0/+371
|\ \ \ | |/ / |/| | Astra spot
| * | Add copyright headerWillem Jan Palenstijn2015-05-151-0/+10
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| * | Add note about Spot to sample scriptWillem Jan Palenstijn2015-05-151-0/+8
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| * | Added ASTRA-Spot operator opTomoFolkert Bleichrodt2015-05-153-0/+353
| | | | | | | | | | | | | | | | | | A Spot operator for the ASTRA projectors. Wraps the forward and backprojection operation into a Spot operator, which can be used with matrix-vector syntax in Matlab.
* | | Sync README.txt with README.mdWillem Jan Palenstijn2015-05-131-3/+6
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* | | Add DOI link for JSB paper as wellWillem Jan Palenstijn2015-05-131-1/+1
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* | | Update README.mdWim van Aarle2015-05-131-2/+7
| | | | | | | | | updated references
* | | fix memleaks in testjoergkappes2015-05-082-0/+10
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* | | fix to small memory allocationjoergkappes2015-05-081-2/+2
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* | | Merge pull request #61 from wjp/xmlnode_cleanupWillem Jan Palenstijn2015-05-0856-730/+639
|\ \ \ | | | | | | | | Clean up XMLNode
| * | | Make XML array handling consistentWillem Jan Palenstijn2015-05-065-117/+127
| | | | | | | | | | | | | | | | setContent and getContent were using different XML formats previously.
| * | | Add extra XMLNode/XMLDocument/Config testWillem Jan Palenstijn2015-05-061-0/+16
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| * | | Change XMLNode* to XMLNodeWillem Jan Palenstijn2015-05-0656-635/+518
| | | | | | | | | | | | | | | | An XMLNode object is already simply a pointer, so no need to dynamically allocate XMLNodes.
* | | | Merge pull request #46 from dmpelt/spot-like-pythonWillem Jan Palenstijn2015-05-085-139/+201
|\ \ \ \ | | | | | | | | | | Add SPOT-like object for Python (overrides `__mul__` and works with scipy.sparse.linalg)
| * | | | Rename optomo.py for Python 2 supportDaniel M. Pelt2015-05-082-1/+1
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| * | | | Use superclass __mul__ in Python OpTomo __mul__Daniel M. Pelt2015-05-071-22/+11
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