diff options
Diffstat (limited to 'matlab/mex')
| -rw-r--r-- | matlab/mex/astra_mex_c.cpp | 4 | ||||
| -rw-r--r-- | matlab/mex/astra_mex_data2d_c.cpp | 4 | ||||
| -rwxr-xr-x | matlab/mex/astra_mex_direct_c.cpp | 348 | ||||
| -rw-r--r-- | matlab/mex/astra_mex_direct_vc09.vcproj | 612 | ||||
| -rw-r--r-- | matlab/mex/astra_mex_direct_vc11.vcxproj | 306 | ||||
| -rw-r--r-- | matlab/mex/astra_mex_log_c.cpp | 8 | ||||
| -rw-r--r-- | matlab/mex/astra_mex_matrix_c.cpp | 2 | ||||
| -rw-r--r-- | matlab/mex/astra_mex_projector3d_c.cpp | 8 | ||||
| -rw-r--r-- | matlab/mex/astra_mex_projector_c.cpp | 9 | ||||
| -rw-r--r-- | matlab/mex/mexHelpFunctions.cpp | 6 | ||||
| -rw-r--r-- | matlab/mex/mexInitFunctions.cpp | 2 | 
11 files changed, 1293 insertions, 16 deletions
| diff --git a/matlab/mex/astra_mex_c.cpp b/matlab/mex/astra_mex_c.cpp index 4a331f5..a9b9654 100644 --- a/matlab/mex/astra_mex_c.cpp +++ b/matlab/mex/astra_mex_c.cpp @@ -36,9 +36,9 @@ $Id$  #include "mexInitFunctions.h"  #include "astra/Globals.h" - +#ifdef ASTRA_CUDA  #include "../cuda/2d/darthelper.h" - +#endif  using namespace std;  using namespace astra; diff --git a/matlab/mex/astra_mex_data2d_c.cpp b/matlab/mex/astra_mex_data2d_c.cpp index 909d229..935e476 100644 --- a/matlab/mex/astra_mex_data2d_c.cpp +++ b/matlab/mex/astra_mex_data2d_c.cpp @@ -222,7 +222,7 @@ void astra_mex_data2d_create(int& nlhs, mxArray* plhs[], int& nrhs, const mxArra  			// logical data		  			if (mxIsLogical(prhs[3])) { -				bool* pbMatlabData = mxGetLogicals(prhs[3]); +				mxLogical* pbMatlabData = mxGetLogicals(prhs[3]);  				int i = 0;  				int col, row;  				for (col = 0; col < dims[1]; ++col) { @@ -322,7 +322,7 @@ void astra_mex_data2d_store(int nlhs, mxArray* plhs[], int nrhs, const mxArray*  		// logical data		  		if (mxIsLogical(prhs[2])) { -			bool* pbMatlabData = mxGetLogicals(prhs[2]); +			mxLogical* pbMatlabData = mxGetLogicals(prhs[2]);  			int i = 0;  			int col, row;  			for (col = 0; col < dims[1]; ++col) { diff --git a/matlab/mex/astra_mex_direct_c.cpp b/matlab/mex/astra_mex_direct_c.cpp new file mode 100755 index 0000000..38b3f59 --- /dev/null +++ b/matlab/mex/astra_mex_direct_c.cpp @@ -0,0 +1,348 @@ +/* +----------------------------------------------------------------------- +Copyright: 2010-2015, iMinds-Vision Lab, University of Antwerp +           2014-2015, CWI, Amsterdam + +Contact: astra@uantwerpen.be +Website: http://sf.net/projects/astra-toolbox + +This file is part of the ASTRA Toolbox. + + +The ASTRA Toolbox is free software: you can redistribute it and/or modify +it under the terms of the GNU General Public License as published by +the Free Software Foundation, either version 3 of the License, or +(at your option) any later version. + +The ASTRA Toolbox is distributed in the hope that it will be useful, +but WITHOUT ANY WARRANTY; without even the implied warranty of +MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +GNU General Public License for more details. + +You should have received a copy of the GNU General Public License +along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. + +----------------------------------------------------------------------- +$Id$ +*/ + +/** \file astra_mex_direct_c.cpp + * + *  \brief Utility functions for low-overhead FP and BP calls. + */ +#include <mex.h> +#include "mexHelpFunctions.h" +#include "mexCopyDataHelpFunctions.h" +#include "mexDataManagerHelpFunctions.h" + +#include <list> + +#include "astra/Globals.h" + +#include "astra/AstraObjectManager.h" + +#include "astra/Float32ProjectionData2D.h" +#include "astra/Float32VolumeData2D.h" +#include "astra/CudaProjector3D.h" +#include "astra/Projector3D.h" +#include "astra/Float32ProjectionData3DMemory.h" +#include "astra/Float32VolumeData3DMemory.h" + +#include "astra/CudaForwardProjectionAlgorithm3D.h" + +#include "astra/CudaBackProjectionAlgorithm3D.h" + +using namespace std; +using namespace astra; + +#define USE_MATLAB_UNDOCUMENTED + + +class CFloat32CustomMemory_simple : public astra::CFloat32CustomMemory { +public: +	CFloat32CustomMemory_simple(float *ptr) { m_fPtr = ptr; } +	~CFloat32CustomMemory_simple() { } +}; + +#ifdef ASTRA_CUDA + +//----------------------------------------------------------------------------------------- +/** + * projection = astra_mex_direct_c('FP3D', projector_id, volume); + * Both 'projection' and 'volume' are Matlab arrays. + */ +void astra_mex_direct_fp3d(int& nlhs, mxArray* plhs[], int& nrhs, const mxArray* prhs[]) +{ +	// TODO: Add an optional way of specifying extra options + +	if (nrhs < 3) { +		mexErrMsgTxt("Not enough arguments. Syntax: astra_mex_direct_c('FP3D', projector_id, data)"); +		return; +	} + +	int iPid = (int)(mxGetScalar(prhs[1])); +	astra::CProjector3D* pProjector; +	pProjector = astra::CProjector3DManager::getSingleton().get(iPid); +	if (!pProjector) { +		mexErrMsgTxt("Projector not found."); +		return; +	} +	if (!pProjector->isInitialized()) { +		mexErrMsgTxt("Projector not initialized."); +		return; +	} +	bool isCuda = false; +	if (dynamic_cast<CCudaProjector3D*>(pProjector)) +		isCuda = true; +	if (!isCuda) { +		mexErrMsgTxt("Only CUDA projectors are currently supported."); +		return; +	} + +	astra::CVolumeGeometry3D* pVolGeom = pProjector->getVolumeGeometry(); +	astra::CProjectionGeometry3D* pProjGeom = pProjector->getProjectionGeometry(); + +	const mxArray* const data = prhs[2]; +	if (!checkDataType(data)) { +		mexErrMsgTxt("Data must be single or double."); +		return; +	} + +	if (!checkDataSize(data, pVolGeom)) { +		mexErrMsgTxt("The dimensions of the data do not match those specified in the geometry."); +		return; +	} + + +	// Allocate input data +	astra::CFloat32VolumeData3DMemory* pInput; +	if (mxIsSingle(data)) { +		astra::CFloat32CustomMemory* m = new CFloat32CustomMemory_simple((float *)mxGetData(data)); +		pInput = new astra::CFloat32VolumeData3DMemory(pVolGeom, m); +	} else { +		pInput = new astra::CFloat32VolumeData3DMemory(pVolGeom); +		copyMexToCFloat32Array(data, pInput->getData(), pInput->getSize()); +	} + + +	// Allocate output data +	// If the input is single, we also allocate single output. +	// Otherwise, double. +	astra::CFloat32ProjectionData3DMemory* pOutput; +	mxArray *pOutputMx; +	if (mxIsSingle(data)) { +		mwSize dims[3]; +		dims[0] = pProjGeom->getDetectorColCount(); +		dims[1] = pProjGeom->getProjectionCount(); +		dims[2] = pProjGeom->getDetectorRowCount(); + +		// Allocate uninitialized mxArray of size dims. +		// (It will be zeroed by CudaForwardProjectionAlgorithm3D) +		const mwSize zero_dims[2] = {0, 0}; +		pOutputMx = mxCreateNumericArray(2, zero_dims, mxSINGLE_CLASS, mxREAL); +		mxSetDimensions(pOutputMx, dims, 3); +		const mwSize num_elems = mxGetNumberOfElements(pOutputMx); +		const mwSize elem_size = mxGetElementSize(pOutputMx); +		mxSetData(pOutputMx, mxMalloc(elem_size * num_elems)); + +		astra::CFloat32CustomMemory* m = new CFloat32CustomMemory_simple((float *)mxGetData(pOutputMx)); +		pOutput = new astra::CFloat32ProjectionData3DMemory(pProjGeom, m); +	} else { +		pOutput = new astra::CFloat32ProjectionData3DMemory(pProjGeom); +	} + +	// Perform FP + +	astra::CCudaForwardProjectionAlgorithm3D* pAlg; +	pAlg = new astra::CCudaForwardProjectionAlgorithm3D(); +	pAlg->initialize(pProjector, pOutput, pInput); + +	if (!pAlg->isInitialized()) { +		mexErrMsgTxt("Error initializing algorithm."); +		// TODO: Delete pOutputMx? +		delete pAlg; +		delete pInput; +		delete pOutput; +		return; +	} + +	pAlg->run(); + +	delete pAlg; + + +	if (mxIsSingle(data)) { + +	} else { +		pOutputMx = createEquivMexArray<mxDOUBLE_CLASS>(pOutput); +		copyCFloat32ArrayToMex(pOutput->getData(), pOutputMx); +	} +	plhs[0] = pOutputMx; + +	delete pOutput; +	delete pInput; +} +//----------------------------------------------------------------------------------------- +/** + * projection = astra_mex_direct_c('BP3D', projector_id, volume); + * Both 'projection' and 'volume' are Matlab arrays. + */ +void astra_mex_direct_bp3d(int& nlhs, mxArray* plhs[], int& nrhs, const mxArray* prhs[]) +{ +	// TODO: Add an optional way of specifying extra options + +	if (nrhs < 3) { +		mexErrMsgTxt("Not enough arguments. Syntax: astra_mex_direct_c('BP3D', projector_id, data)"); +		return; +	} + +	int iPid = (int)(mxGetScalar(prhs[1])); +	astra::CProjector3D* pProjector; +	pProjector = astra::CProjector3DManager::getSingleton().get(iPid); +	if (!pProjector) { +		mexErrMsgTxt("Projector not found."); +		return; +	} +	if (!pProjector->isInitialized()) { +		mexErrMsgTxt("Projector not initialized."); +		return; +	} +	bool isCuda = false; +	if (dynamic_cast<CCudaProjector3D*>(pProjector)) +		isCuda = true; +	if (!isCuda) { +		mexErrMsgTxt("Only CUDA projectors are currently supported."); +		return; +	} + +	astra::CVolumeGeometry3D* pVolGeom = pProjector->getVolumeGeometry(); +	astra::CProjectionGeometry3D* pProjGeom = pProjector->getProjectionGeometry(); + +	const mxArray* const data = prhs[2]; +	if (!checkDataType(data)) { +		mexErrMsgTxt("Data must be single or double."); +		return; +	} + +	if (!checkDataSize(data, pProjGeom)) { +		mexErrMsgTxt("The dimensions of the data do not match those specified in the geometry."); +		return; +	} + + +	// Allocate input data +	astra::CFloat32ProjectionData3DMemory* pInput; +	if (mxIsSingle(data)) { +		astra::CFloat32CustomMemory* m = new CFloat32CustomMemory_simple((float *)mxGetData(data)); +		pInput = new astra::CFloat32ProjectionData3DMemory(pProjGeom, m); +	} else { +		pInput = new astra::CFloat32ProjectionData3DMemory(pProjGeom); +		copyMexToCFloat32Array(data, pInput->getData(), pInput->getSize()); +	} + + +	// Allocate output data +	// If the input is single, we also allocate single output. +	// Otherwise, double. +	astra::CFloat32VolumeData3DMemory* pOutput; +	mxArray *pOutputMx; +	if (mxIsSingle(data)) { +		mwSize dims[3]; +		dims[0] = pVolGeom->getGridColCount(); +		dims[1] = pVolGeom->getGridRowCount(); +		dims[2] = pVolGeom->getGridSliceCount(); + +		// Allocate uninitialized mxArray of size dims. +		// (It will be zeroed by CudaBackProjectionAlgorithm3D) +		const mwSize zero_dims[2] = {0, 0}; +		pOutputMx = mxCreateNumericArray(2, zero_dims, mxSINGLE_CLASS, mxREAL); +		mxSetDimensions(pOutputMx, dims, 3); +		const mwSize num_elems = mxGetNumberOfElements(pOutputMx); +		const mwSize elem_size = mxGetElementSize(pOutputMx); +		mxSetData(pOutputMx, mxMalloc(elem_size * num_elems)); + +		astra::CFloat32CustomMemory* m = new CFloat32CustomMemory_simple((float *)mxGetData(pOutputMx)); +		pOutput = new astra::CFloat32VolumeData3DMemory(pVolGeom, m); +	} else { +		pOutput = new astra::CFloat32VolumeData3DMemory(pVolGeom); +	} + +	// Perform BP + +	astra::CCudaBackProjectionAlgorithm3D* pAlg; +	pAlg = new astra::CCudaBackProjectionAlgorithm3D(); +	pAlg->initialize(pProjector, pInput, pOutput); + +	if (!pAlg->isInitialized()) { +		mexErrMsgTxt("Error initializing algorithm."); +		// TODO: Delete pOutputMx? +		delete pAlg; +		delete pInput; +		delete pOutput; +		return; +	} + +	pAlg->run(); + +	delete pAlg; + + +	if (mxIsSingle(data)) { + +	} else { +		pOutputMx = createEquivMexArray<mxDOUBLE_CLASS>(pOutput); +		copyCFloat32ArrayToMex(pOutput->getData(), pOutputMx); +	} +	plhs[0] = pOutputMx; + +	delete pOutput; +	delete pInput; +} + +#endif + +//----------------------------------------------------------------------------------------- + +static void printHelp() +{ +	mexPrintf("Please specify a mode of operation.\n"); +	mexPrintf("Valid modes: FP3D, BP3D\n"); +} + + +//----------------------------------------------------------------------------------------- +/** + * ... = astra_mex_direct_c(mode,...); + */ +void mexFunction(int nlhs, mxArray* plhs[], +				 int nrhs, const mxArray* prhs[]) +{ + +	// INPUT: Mode +	string sMode; +	if (1 <= nrhs) { +		sMode = mexToString(prhs[0]); +	} else { +		printHelp(); +		return; +	} + +#ifndef ASTRA_CUDA +	mexErrMsgTxt("Only CUDA projectors are currently supported."); +	return; +#else + +	// 3D data +	if (sMode == "FP3D") { +		astra_mex_direct_fp3d(nlhs, plhs, nrhs, prhs); +	} else if (sMode == "BP3D") { +		astra_mex_direct_bp3d(nlhs, plhs, nrhs, prhs); +	} else { +		printHelp(); +	} +#endif + +	return; +} + + diff --git a/matlab/mex/astra_mex_direct_vc09.vcproj b/matlab/mex/astra_mex_direct_vc09.vcproj new file mode 100644 index 0000000..04b49ac --- /dev/null +++ b/matlab/mex/astra_mex_direct_vc09.vcproj @@ -0,0 +1,612 @@ +<?xml version="1.0" encoding="Windows-1252"?> +<VisualStudioProject +	ProjectType="Visual C++" +	Version="9.00" +	Name="astra_mex_direct" +	ProjectGUID="{85FE09A6-FA49-4314-A2B1-59D77C7442A8}" +	RootNamespace="astraMatlab" +	TargetFrameworkVersion="131072" +	> +	<Platforms> +		<Platform +			Name="Win32" +		/> +		<Platform +			Name="x64" +		/> +	</Platforms> +	<ToolFiles> +	</ToolFiles> +	<Configurations> +		<Configuration +			Name="Debug_CUDA|Win32" +			OutputDirectory="$(SolutionDir)bin\$(PlatformName)\$(ConfigurationName)" +			IntermediateDirectory="$(OutDir)\obj\$(ProjectName)" +			ConfigurationType="2" +			> +			<Tool +				Name="VCPreBuildEventTool" +			/> +			<Tool +				Name="VCCustomBuildTool" +			/> +			<Tool +				Name="VCXMLDataGeneratorTool" +			/> +			<Tool +				Name="VCWebServiceProxyGeneratorTool" +			/> +			<Tool +				Name="VCMIDLTool" +			/> +			<Tool +				Name="VCManagedResourceCompilerTool" +			/> +			<Tool +				Name="VCResourceCompilerTool" +			/> +			<Tool +				Name="VCPreLinkEventTool" +			/> +			<Tool +				Name="VCALinkTool" +			/> +			<Tool +				Name="VCManifestTool" +			/> +			<Tool +				Name="VCXDCMakeTool" +			/> +			<Tool +				Name="VCBscMakeTool" +			/> +			<Tool +				Name="VCFxCopTool" +			/> +			<Tool +				Name="VCAppVerifierTool" +			/> +			<Tool +				Name="VCPostBuildEventTool" +			/> +			<Tool +				Name="VCCLCompilerTool" +				AdditionalIncludeDirectories="$(MATLAB_ROOT)\extern\include\;"$(CUDA_INC_PATH)";..\..\lib\include;..\..\include" +				PreprocessorDefinitions="ASTRA_CUDA;__SSE2__" +				Optimization="0" +				RuntimeLibrary="3" +				EnableEnhancedInstructionSet="2" +				OpenMP="true" +				AdditionalOptions="/MP" +			/> +			<Tool +				Name="VCLinkerTool" +				AdditionalDependencies="AstraCuda32D.lib libmex.lib libmx.lib libut.lib" +				OutputFile="$(OutDir)\$(ProjectName)_c.mexw32" +				AdditionalLibraryDirectories="..\..\bin\win32;$(MATLAB_ROOT)\extern\lib\win32\microsoft;..\..\lib\win32" +				ModuleDefinitionFile="mex.def" +				GenerateDebugInformation="true" +				TargetMachine="1" +			/> +		</Configuration> +		<Configuration +			Name="Debug_CUDA|x64" +			OutputDirectory="$(SolutionDir)bin\$(PlatformName)\$(ConfigurationName)" +			IntermediateDirectory="$(OutDir)\obj\$(ProjectName)" +			ConfigurationType="2" +			> +			<Tool +				Name="VCPreBuildEventTool" +			/> +			<Tool +				Name="VCCustomBuildTool" +			/> +			<Tool +				Name="VCXMLDataGeneratorTool" +			/> +			<Tool +				Name="VCWebServiceProxyGeneratorTool" +			/> +			<Tool +				Name="VCMIDLTool" +			/> +			<Tool +				Name="VCManagedResourceCompilerTool" +			/> +			<Tool +				Name="VCResourceCompilerTool" +			/> +			<Tool +				Name="VCPreLinkEventTool" +			/> +			<Tool +				Name="VCALinkTool" +			/> +			<Tool +				Name="VCManifestTool" +			/> +			<Tool +				Name="VCXDCMakeTool" +			/> +			<Tool +				Name="VCBscMakeTool" +			/> +			<Tool +				Name="VCFxCopTool" +			/> +			<Tool +				Name="VCAppVerifierTool" +			/> +			<Tool +				Name="VCPostBuildEventTool" +			/> +			<Tool +				Name="VCCLCompilerTool" +				AdditionalIncludeDirectories="$(MATLAB_ROOT)\extern\include\;"$(CUDA_INC_PATH)";..\..\lib\include;..\..\include" +				PreprocessorDefinitions="ASTRA_CUDA;__SSE2__" +				Optimization="0" +				RuntimeLibrary="3" +				OpenMP="true" +				AdditionalOptions="/MP" +			/> +			<Tool +				Name="VCLinkerTool" +				AdditionalDependencies="AstraCuda64D.lib libmex.lib libmx.lib libut.lib" +				OutputFile="$(OutDir)\$(ProjectName)_c.mexw64" +				AdditionalLibraryDirectories="..\..\bin\x64;$(MATLAB_ROOT)\extern\lib\win64\microsoft;..\..\lib\x64" +				ModuleDefinitionFile="mex.def" +				GenerateDebugInformation="true" +				TargetMachine="17" +			/> +		</Configuration> +		<Configuration +			Name="Debug|Win32" +			OutputDirectory="$(SolutionDir)bin\$(PlatformName)\$(ConfigurationName)" +			IntermediateDirectory="$(OutDir)\obj\$(ProjectName)" +			ConfigurationType="2" +			> +			<Tool +				Name="VCPreBuildEventTool" +			/> +			<Tool +				Name="VCCustomBuildTool" +			/> +			<Tool +				Name="VCXMLDataGeneratorTool" +			/> +			<Tool +				Name="VCWebServiceProxyGeneratorTool" +			/> +			<Tool +				Name="VCMIDLTool" +			/> +			<Tool +				Name="VCManagedResourceCompilerTool" +			/> +			<Tool +				Name="VCResourceCompilerTool" +			/> +			<Tool +				Name="VCPreLinkEventTool" +			/> +			<Tool +				Name="VCALinkTool" +			/> +			<Tool +				Name="VCManifestTool" +			/> +			<Tool +				Name="VCXDCMakeTool" +			/> +			<Tool +				Name="VCBscMakeTool" +			/> +			<Tool +				Name="VCFxCopTool" +			/> +			<Tool +				Name="VCAppVerifierTool" +			/> +			<Tool +				Name="VCPostBuildEventTool" +			/> +			<Tool +				Name="VCCLCompilerTool" +				AdditionalIncludeDirectories="$(MATLAB_ROOT)\extern\include\;..\..\lib\include;..\..\include" +				PreprocessorDefinitions="__SSE2__" +				Optimization="0" +				RuntimeLibrary="3" +				EnableEnhancedInstructionSet="2" +				OpenMP="true" +				AdditionalOptions="/MP" +			/> +			<Tool +				Name="VCLinkerTool" +				AdditionalDependencies="Astra32D.lib libmex.lib libmx.lib libut.lib" +				OutputFile="$(OutDir)\$(ProjectName)_c.mexw32" +				AdditionalLibraryDirectories="..\..\bin\win32;$(MATLAB_ROOT)\extern\lib\win32\microsoft;..\..\lib\win32" +				ModuleDefinitionFile="mex.def" +				GenerateDebugInformation="true" +				TargetMachine="1" +			/> +		</Configuration> +		<Configuration +			Name="Debug|x64" +			OutputDirectory="$(SolutionDir)bin\$(PlatformName)\$(ConfigurationName)" +			IntermediateDirectory="$(OutDir)\obj\$(ProjectName)" +			ConfigurationType="2" +			> +			<Tool +				Name="VCPreBuildEventTool" +			/> +			<Tool +				Name="VCCustomBuildTool" +			/> +			<Tool +				Name="VCXMLDataGeneratorTool" +			/> +			<Tool +				Name="VCWebServiceProxyGeneratorTool" +			/> +			<Tool +				Name="VCMIDLTool" +			/> +			<Tool +				Name="VCManagedResourceCompilerTool" +			/> +			<Tool +				Name="VCResourceCompilerTool" +			/> +			<Tool +				Name="VCPreLinkEventTool" +			/> +			<Tool +				Name="VCALinkTool" +			/> +			<Tool +				Name="VCManifestTool" +			/> +			<Tool +				Name="VCXDCMakeTool" +			/> +			<Tool +				Name="VCBscMakeTool" +			/> +			<Tool +				Name="VCFxCopTool" +			/> +			<Tool +				Name="VCAppVerifierTool" +			/> +			<Tool +				Name="VCPostBuildEventTool" +			/> +			<Tool +				Name="VCCLCompilerTool" +				AdditionalIncludeDirectories="$(MATLAB_ROOT)\extern\include\;..\..\lib\include;..\..\include" +				PreprocessorDefinitions="__SSE2__" +				Optimization="0" +				RuntimeLibrary="3" +				OpenMP="true" +				AdditionalOptions="/MP" +			/> +			<Tool +				Name="VCLinkerTool" +				AdditionalDependencies="Astra64D.lib libmex.lib libmx.lib libut.lib" +				OutputFile="$(OutDir)\$(ProjectName)_c.mexw64" +				AdditionalLibraryDirectories="..\..\bin\x64;$(MATLAB_ROOT)\extern\lib\win64\microsoft;..\..\lib\x64" +				ModuleDefinitionFile="mex.def" +				GenerateDebugInformation="true" +				TargetMachine="17" +			/> +		</Configuration> +		<Configuration +			Name="Release_CUDA|Win32" +			OutputDirectory="$(SolutionDir)bin\$(PlatformName)\$(ConfigurationName)" +			IntermediateDirectory="$(OutDir)\obj\$(ProjectName)" +			ConfigurationType="2" +			> +			<Tool +				Name="VCPreBuildEventTool" +			/> +			<Tool +				Name="VCCustomBuildTool" +			/> +			<Tool +				Name="VCXMLDataGeneratorTool" +			/> +			<Tool +				Name="VCWebServiceProxyGeneratorTool" +			/> +			<Tool +				Name="VCMIDLTool" +			/> +			<Tool +				Name="VCManagedResourceCompilerTool" +			/> +			<Tool +				Name="VCResourceCompilerTool" +			/> +			<Tool +				Name="VCPreLinkEventTool" +			/> +			<Tool +				Name="VCALinkTool" +			/> +			<Tool +				Name="VCManifestTool" +			/> +			<Tool +				Name="VCXDCMakeTool" +			/> +			<Tool +				Name="VCBscMakeTool" +			/> +			<Tool +				Name="VCFxCopTool" +			/> +			<Tool +				Name="VCAppVerifierTool" +			/> +			<Tool +				Name="VCPostBuildEventTool" +			/> +			<Tool +				Name="VCCLCompilerTool" +				AdditionalIncludeDirectories="$(MATLAB_ROOT)\extern\include\;"$(CUDA_INC_PATH)";..\..\lib\include;..\..\include" +				PreprocessorDefinitions="ASTRA_CUDA;__SSE2__" +				Optimization="2" +				RuntimeLibrary="2" +				EnableEnhancedInstructionSet="2" +				OpenMP="true" +				AdditionalOptions="/MP" +			/> +			<Tool +				Name="VCLinkerTool" +				AdditionalDependencies="AstraCuda32.lib libmex.lib libmx.lib libut.lib" +				OutputFile="$(OutDir)\$(ProjectName)_c.mexw32" +				AdditionalLibraryDirectories="..\..\bin\win32;$(MATLAB_ROOT)\extern\lib\win32\microsoft;..\..\lib\win32" +				ModuleDefinitionFile="mex.def" +				GenerateDebugInformation="false" +				TargetMachine="1" +			/> +		</Configuration> +		<Configuration 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<MultiProcessorCompilation>true</MultiProcessorCompilation> +    </ClCompile> +    <Link> +      <OutputFile>$(OutDir)$(ProjectName)_c.mexw64</OutputFile> +      <AdditionalDependencies>Astra64.lib;libmex.lib;libmx.lib;libut.lib;%(AdditionalDependencies)</AdditionalDependencies> +      <AdditionalLibraryDirectories>..\..\lib\x64\;..\..\bin\x64\Release;$(MATLAB_ROOT)\extern\lib\win64\microsoft;%(AdditionalLibraryDirectories)</AdditionalLibraryDirectories> +      <ModuleDefinitionFile>mex.def</ModuleDefinitionFile> +      <GenerateDebugInformation>true</GenerateDebugInformation> +    </Link> +  </ItemDefinitionGroup> +  <ItemGroup> +    <ClCompile Include="astra_mex_direct_c.cpp" /> +    <ClCompile Include="mexHelpFunctions.cpp" /> +    <ClCompile Include="mexInitFunctions.cpp" /> +  </ItemGroup> +  <ItemGroup> +    <ClInclude Include="mexHelpFunctions.h" /> +    <ClInclude Include="mexInitFunctions.h" /> +  </ItemGroup> +  <Import Project="$(VCTargetsPath)\Microsoft.Cpp.targets" /> +  <ImportGroup Label="ExtensionTargets"> +  </ImportGroup> +</Project>
\ No newline at end of file diff --git a/matlab/mex/astra_mex_log_c.cpp b/matlab/mex/astra_mex_log_c.cpp index ea4621e..905612c 100644 --- a/matlab/mex/astra_mex_log_c.cpp +++ b/matlab/mex/astra_mex_log_c.cpp @@ -55,7 +55,7 @@ void astra_mex_log_debug(int nlhs, mxArray* plhs[], int nrhs, const mxArray* prh  	string filename = mexToString(prhs[1]);  	int linenumber = (int)mxGetScalar(prhs[2]);  	string message = mexToString(prhs[3]); -	astra::CLogger::debug(filename.c_str(),linenumber,message.c_str()); +	astra::CLogger::debug(filename.c_str(),linenumber,"%s",message.c_str());  }  //----------------------------------------------------------------------------------------- @@ -75,7 +75,7 @@ void astra_mex_log_info(int nlhs, mxArray* plhs[], int nrhs, const mxArray* prhs  	string filename = mexToString(prhs[1]);  	int linenumber = (int)mxGetScalar(prhs[2]);  	string message = mexToString(prhs[3]); -	astra::CLogger::info(filename.c_str(),linenumber,message.c_str()); +	astra::CLogger::info(filename.c_str(),linenumber,"%s",message.c_str());  }  //----------------------------------------------------------------------------------------- @@ -95,7 +95,7 @@ void astra_mex_log_warn(int nlhs, mxArray* plhs[], int nrhs, const mxArray* prhs  	string filename = mexToString(prhs[1]);  	int linenumber = (int)mxGetScalar(prhs[2]);  	string message = mexToString(prhs[3]); -	astra::CLogger::warn(filename.c_str(),linenumber,message.c_str()); +	astra::CLogger::warn(filename.c_str(),linenumber,"%s",message.c_str());  }  //----------------------------------------------------------------------------------------- @@ -115,7 +115,7 @@ void astra_mex_log_error(int nlhs, mxArray* plhs[], int nrhs, const mxArray* prh  	string filename = mexToString(prhs[1]);  	int linenumber = (int)mxGetScalar(prhs[2]);  	string message = mexToString(prhs[3]); -	astra::CLogger::error(filename.c_str(),linenumber,message.c_str()); +	astra::CLogger::error(filename.c_str(),linenumber,"%s",message.c_str());  }  //----------------------------------------------------------------------------------------- diff --git a/matlab/mex/astra_mex_matrix_c.cpp b/matlab/mex/astra_mex_matrix_c.cpp index aa31383..e07ddb6 100644 --- a/matlab/mex/astra_mex_matrix_c.cpp +++ b/matlab/mex/astra_mex_matrix_c.cpp @@ -112,7 +112,7 @@ static bool matlab_to_astra(const mxArray* _rhs, CSparseMatrix* _pMatrix)  	mwIndex *colStarts = mxGetJc(_rhs);  	mwIndex *rowIndices = mxGetIr(_rhs);  	double *floatValues = 0; -	bool *boolValues = 0; +	mxLogical *boolValues = 0;  	bool bLogical = mxIsLogical(_rhs);  	if (bLogical)  		boolValues = mxGetLogicals(_rhs); diff --git a/matlab/mex/astra_mex_projector3d_c.cpp b/matlab/mex/astra_mex_projector3d_c.cpp index c3b547f..e25802c 100644 --- a/matlab/mex/astra_mex_projector3d_c.cpp +++ b/matlab/mex/astra_mex_projector3d_c.cpp @@ -137,7 +137,9 @@ void astra_mex_projector3d_get_projection_geometry(int nlhs, mxArray* plhs[], in  	// step3: get projection_geometry and turn it into a MATLAB struct  	if (1 <= nlhs) { -		plhs[0] = configToStruct(pProjector->getProjectionGeometry()->getConfiguration()); +		Config *cfg = pProjector->getProjectionGeometry()->getConfiguration(); +		plhs[0] = configToStruct(cfg); +		delete cfg;  	}  } @@ -163,7 +165,9 @@ void astra_mex_projector3d_get_volume_geometry(int nlhs, mxArray* plhs[], int nr  	// step3: get projection_geometry and turn it into a MATLAB struct  	if (1 <= nlhs) { -		plhs[0] = configToStruct(pProjector->getVolumeGeometry()->getConfiguration()); +		Config *cfg = pProjector->getVolumeGeometry()->getConfiguration(); +		plhs[0] = configToStruct(cfg); +		delete cfg;  	}  } diff --git a/matlab/mex/astra_mex_projector_c.cpp b/matlab/mex/astra_mex_projector_c.cpp index 204ba8e..bf701af 100644 --- a/matlab/mex/astra_mex_projector_c.cpp +++ b/matlab/mex/astra_mex_projector_c.cpp @@ -160,7 +160,9 @@ void astra_mex_projector_projection_geometry(int nlhs, mxArray* plhs[], int nrhs  	// step3: get projection_geometry and turn it into a MATLAB struct  	if (1 <= nlhs) { -		plhs[0] = configToStruct(pProjector->getProjectionGeometry()->getConfiguration()); +		Config *cfg =  pProjector->getProjectionGeometry()->getConfiguration(); +		plhs[0] = configToStruct(cfg); +		delete cfg;  	}  } @@ -189,8 +191,9 @@ void astra_mex_projector_volume_geometry(int nlhs, mxArray* plhs[], int nrhs, co  	// step3: get projection_geometry and turn it into a MATLAB struct  	if (1 <= nlhs) { -		plhs[0] = configToStruct(pProjector->getVolumeGeometry()->getConfiguration()); - +		Config *cfg = pProjector->getVolumeGeometry()->getConfiguration(); +		plhs[0] = configToStruct(cfg); +		delete cfg;  	}  } diff --git a/matlab/mex/mexHelpFunctions.cpp b/matlab/mex/mexHelpFunctions.cpp index 87a9672..58e84d2 100644 --- a/matlab/mex/mexHelpFunctions.cpp +++ b/matlab/mex/mexHelpFunctions.cpp @@ -336,7 +336,11 @@ mxArray* XMLNodeToStruct(astra::XMLNode node)  		// option  		if (subnode.getName() == "Option") { -			mOptions[subnode.getAttribute("key")] = stringToMxArray(subnode.getAttribute("value")); +			if(subnode.hasAttribute("value")){ +				mOptions[subnode.getAttribute("key")] = stringToMxArray(subnode.getAttribute("value")); +			}else{ +				mOptions[subnode.getAttribute("key")] = stringToMxArray(subnode.getContent()); +			}  		}  		// regular content diff --git a/matlab/mex/mexInitFunctions.cpp b/matlab/mex/mexInitFunctions.cpp index c11c7d5..bd3df2c 100644 --- a/matlab/mex/mexInitFunctions.cpp +++ b/matlab/mex/mexInitFunctions.cpp @@ -8,7 +8,7 @@ bool mexIsInitialized=false;   *   */  void logCallBack(const char *msg, size_t len){ -    mexPrintf(msg); +    mexPrintf("%s",msg);  }  /** | 
