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author | Willem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl> | 2014-11-25 18:26:11 +0100 |
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committer | Willem Jan Palenstijn <Willem.Jan.Palenstijn@cwi.nl> | 2015-01-19 11:31:43 +0100 |
commit | 70f522a7a64fa609766c1f5d5edcddc6ec143c6c (patch) | |
tree | 4b1711b0afd297c996c9f5b008d131543ab044e1 | |
parent | 2a28642b457afc13a2f8fc6219044994c7dc51e0 (diff) | |
download | astra-70f522a7a64fa609766c1f5d5edcddc6ec143c6c.tar.gz astra-70f522a7a64fa609766c1f5d5edcddc6ec143c6c.tar.bz2 astra-70f522a7a64fa609766c1f5d5edcddc6ec143c6c.tar.xz astra-70f522a7a64fa609766c1f5d5edcddc6ec143c6c.zip |
Remove unused files
-rw-r--r-- | cuda/2d/dataop.cu | 130 | ||||
-rw-r--r-- | cuda/2d/dataop.h | 47 | ||||
-rw-r--r-- | src/ConvexHullAlgorithm.cpp | 239 | ||||
-rw-r--r-- | src/CudaDataOperationAlgorithm.cpp | 1 |
4 files changed, 0 insertions, 417 deletions
diff --git a/cuda/2d/dataop.cu b/cuda/2d/dataop.cu deleted file mode 100644 index 4b64775..0000000 --- a/cuda/2d/dataop.cu +++ /dev/null @@ -1,130 +0,0 @@ -/* ------------------------------------------------------------------------ -Copyright: 2010-2014, iMinds-Vision Lab, University of Antwerp - 2014, CWI, Amsterdam - -Contact: astra@uantwerpen.be -Website: http://sf.net/projects/astra-toolbox - -This file is part of the ASTRA Toolbox. - - -The ASTRA Toolbox is free software: you can redistribute it and/or modify -it under the terms of the GNU General Public License as published by -the Free Software Foundation, either version 3 of the License, or -(at your option) any later version. - -The ASTRA Toolbox is distributed in the hope that it will be useful, -but WITHOUT ANY WARRANTY; without even the implied warranty of -MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -GNU General Public License for more details. - -You should have received a copy of the GNU General Public License -along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. - ------------------------------------------------------------------------ -$Id$ -*/ - -#include "util.h" -#include "dataop.h" -#include "arith.h" -#include <cassert> - -namespace astraCUDA { - -void operationVolumeMult(float* data1, float* data2, unsigned int width, unsigned int height) -{ - float* D_data1; - float* D_data2; - - unsigned int pitch; - allocateVolume(D_data1, width, height, pitch); - copyVolumeToDevice(data1, width, width, height, D_data1, pitch); - - allocateVolume(D_data2, width, height, pitch); - copyVolumeToDevice(data2, width, width, height, D_data2, pitch); - - processVol<opMul, VOL>(D_data1, D_data2, pitch, width, height); - - copyVolumeFromDevice(data1, width, width, height, D_data1, pitch); - - cudaFree(D_data1); - cudaFree(D_data2); -} - -void operationVolumeMultScalarMask(float* data, float* mask, float scalar, unsigned int width, unsigned int height) -{ - float* D_data; - float* D_mask; - - unsigned int pitch; - allocateVolume(D_data, width, height, pitch); - copyVolumeToDevice(data, width, width, height, D_data, pitch); - - allocateVolume(D_mask, width, height, pitch); - copyVolumeToDevice(mask, width, width, height, D_mask, pitch); - - processVol<opMulMask, VOL>(D_data, D_mask, scalar, pitch, width, height); - - copyVolumeFromDevice(data, width, width, height, D_data, pitch); - - cudaFree(D_data); - cudaFree(D_mask); -} - - -void operationVolumeMultScalar(float* data, float scalar, unsigned int width, unsigned int height) -{ - float* D_data; - - unsigned int pitch; - allocateVolume(D_data, width, height, pitch); - copyVolumeToDevice(data, width, width, height, D_data, pitch); - - processVol<opMul, VOL>(D_data, scalar, pitch, width, height); - - copyVolumeFromDevice(data, width, width, height, D_data, pitch); - - cudaFree(D_data); -} - - -void operationVolumeAdd(float* data1, float* data2, unsigned int width, unsigned int height) -{ - float* D_data1; - float* D_data2; - - unsigned int pitch; - allocateVolume(D_data1, width, height, pitch); - copyVolumeToDevice(data1, width, width, height, D_data1, pitch); - - allocateVolume(D_data2, width, height, pitch); - copyVolumeToDevice(data2, width, width, height, D_data2, pitch); - - processVol<opAdd, VOL>(D_data1, D_data2, pitch, width, height); - - copyVolumeFromDevice(data1, width, width, height, D_data1, pitch); - - cudaFree(D_data1); - cudaFree(D_data2); -} - - -void operationVolumeAddScalar(float* data, float scalar, unsigned int width, unsigned int height) -{ - float* D_data; - - unsigned int pitch; - allocateVolume(D_data, width, height, pitch); - copyVolumeToDevice(data, width, width, height, D_data, pitch); - - processVol<opAdd, VOL>(D_data, scalar, pitch, width, height); - - copyVolumeFromDevice(data, width, width, height, D_data, pitch); - - cudaFree(D_data); -} - - -} diff --git a/cuda/2d/dataop.h b/cuda/2d/dataop.h deleted file mode 100644 index 2693f1a..0000000 --- a/cuda/2d/dataop.h +++ /dev/null @@ -1,47 +0,0 @@ -/* ------------------------------------------------------------------------ -Copyright: 2010-2014, iMinds-Vision Lab, University of Antwerp - 2014, CWI, Amsterdam - -Contact: astra@uantwerpen.be -Website: http://sf.net/projects/astra-toolbox - -This file is part of the ASTRA Toolbox. - - -The ASTRA Toolbox is free software: you can redistribute it and/or modify -it under the terms of the GNU General Public License as published by -the Free Software Foundation, either version 3 of the License, or -(at your option) any later version. - -The ASTRA Toolbox is distributed in the hope that it will be useful, -but WITHOUT ANY WARRANTY; without even the implied warranty of -MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -GNU General Public License for more details. - -You should have received a copy of the GNU General Public License -along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. - ------------------------------------------------------------------------ -$Id$ -*/ - -#ifndef _CUDA_DATAOP_H -#define _CUDA_DATAOP_H - -#include <cuda.h> - -namespace astraCUDA { - - void operationVolumeMult(float* data1, float* data2, unsigned int width, unsigned int height); - - void operationVolumeMultScalar(float* data, float scalar, unsigned int width, unsigned int height); - void operationVolumeMultScalarMask(float* data, float* mask, float scalar, unsigned int width, unsigned int height); - - void operationVolumeAdd(float* data1, float* data2, unsigned int width, unsigned int height); - - void operationVolumeAddScalar(float* data, float scalar, unsigned int width, unsigned int height); - -} - -#endif diff --git a/src/ConvexHullAlgorithm.cpp b/src/ConvexHullAlgorithm.cpp deleted file mode 100644 index fa69431..0000000 --- a/src/ConvexHullAlgorithm.cpp +++ /dev/null @@ -1,239 +0,0 @@ -/* ------------------------------------------------------------------------ -Copyright: 2010-2014, iMinds-Vision Lab, University of Antwerp - 2014, CWI, Amsterdam - -Contact: astra@uantwerpen.be -Website: http://sf.net/projects/astra-toolbox - -This file is part of the ASTRA Toolbox. - - -The ASTRA Toolbox is free software: you can redistribute it and/or modify -it under the terms of the GNU General Public License as published by -the Free Software Foundation, either version 3 of the License, or -(at your option) any later version. - -The ASTRA Toolbox is distributed in the hope that it will be useful, -but WITHOUT ANY WARRANTY; without even the implied warranty of -MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the -GNU General Public License for more details. - -You should have received a copy of the GNU General Public License -along with the ASTRA Toolbox. If not, see <http://www.gnu.org/licenses/>. - ------------------------------------------------------------------------ -$Id$ -*/ - -#include "astra/ConvexHullAlgorithm.h" - -#include <boost/lexical_cast.hpp> - -#include "astra/AstraObjectManager.h" -#include "astra/DataProjectorPolicies.h" - -using namespace std; - -namespace astra { - -#include "astra/Projector2DImpl.inl" - -// type of the algorithm, needed to register with CAlgorithmFactory -std::string CConvexHullAlgorithm::type = "ConvexHull"; - -//---------------------------------------------------------------------------------------- -// Constructor -CConvexHullAlgorithm::CConvexHullAlgorithm() -{ - _clear(); -} - -//--------------------------------------------------------------------------------------- -// Initialize - C++ -CConvexHullAlgorithm::CConvexHullAlgorithm(CProjector2D* _pProjector, - CFloat32ProjectionData2D* _pSinogram, - CFloat32VolumeData2D* _pReconstructionMask) -{ - _clear(); - initialize(_pProjector, _pSinogram, _pReconstructionMask); -} - -//---------------------------------------------------------------------------------------- -// Destructor -CConvexHullAlgorithm::~CConvexHullAlgorithm() -{ - clear(); -} - -//--------------------------------------------------------------------------------------- -// Clear - Constructors -void CConvexHullAlgorithm::_clear() -{ - m_bIsInitialized = false; - - m_pProjectionPixelWeight = NULL; - m_pReconstructionMask = NULL; - m_pSinogram = NULL; - - m_pProjector = NULL; - m_pDataProjector = NULL; -} - -//--------------------------------------------------------------------------------------- -// Clear - Public -void CConvexHullAlgorithm::clear() -{ - m_bIsInitialized = false; - - ASTRA_DELETE(m_pProjectionPixelWeight); - m_pReconstructionMask = NULL; - m_pSinogram = NULL; - - m_pProjector = NULL; - ASTRA_DELETE(m_pDataProjector); -} - -//---------------------------------------------------------------------------------------- -// Check -bool CConvexHullAlgorithm::_check() -{ - ASTRA_CONFIG_CHECK(m_pReconstructionMask, "ConvexHull", "Invalid ReconstructionMask Object"); - ASTRA_CONFIG_CHECK(m_pReconstructionMask->isInitialized(), "ConvexHull", "Invalid ReconstructionMask Object"); - ASTRA_CONFIG_CHECK(m_pProjectionPixelWeight, "ConvexHull", "Invalid ProjectionPixelWeight Object"); - ASTRA_CONFIG_CHECK(m_pProjectionPixelWeight->isInitialized(), "ConvexHull", "Invalid ProjectionPixelWeight Object"); - ASTRA_CONFIG_CHECK(m_pSinogram, "ConvexHull", "Invalid Sinogram Object"); - ASTRA_CONFIG_CHECK(m_pSinogram->isInitialized(), "ConvexHull", "Invalid Sinogram Object"); - - ASTRA_CONFIG_CHECK(m_pDataProjector, "ConvexHull", "Invalid Data Projector Policy"); - ASTRA_CONFIG_CHECK(m_pProjector, "ConvexHull", "Invalid Projector Object"); - ASTRA_CONFIG_CHECK(m_pProjector->isInitialized(), "ConvexHull", "Invalid Projector Object"); - - return true; -} - -//--------------------------------------------------------------------------------------- -// Initialize - Config -bool CConvexHullAlgorithm::initialize(const Config& _cfg) -{ - ASTRA_ASSERT(_cfg.self); - - // if already initialized, clear first - if (m_bIsInitialized) { - clear(); - } - - // projector - XMLNode* node = _cfg.self->getSingleNode("ProjectorId"); - ASTRA_CONFIG_CHECK(node, "ConvexHull", "No ProjectorId tag specified."); - int id = boost::lexical_cast<int>(node->getContent()); - m_pProjector = CProjector2DManager::getSingleton().get(id); - ASTRA_DELETE(node); - - // sinogram data - node = _cfg.self->getSingleNode("ProjectionDataId"); - ASTRA_CONFIG_CHECK(node, "ConvexHull", "No ProjectionDataId tag specified."); - id = boost::lexical_cast<int>(node->getContent()); - m_pSinogram = dynamic_cast<CFloat32ProjectionData2D*>(CData2DManager::getSingleton().get(id)); - ASTRA_DELETE(node); - - // reconstruction mask - node = _cfg.self->getSingleNode("ConvexHullDataId"); - ASTRA_CONFIG_CHECK(node, "ConvexHull", "No ReconstructionDataId tag specified."); - id = boost::lexical_cast<int>(node->getContent()); - m_pReconstructionMask = dynamic_cast<CFloat32VolumeData2D*>(CData2DManager::getSingleton().get(id)); - ASTRA_DELETE(node); - - // init data objects and data projectors - _init(); - - // success - m_bIsInitialized = _check(); - return m_bIsInitialized; -} - -//--------------------------------------------------------------------------------------- -// Initialize - C++ -bool CConvexHullAlgorithm::initialize(CProjector2D* _pProjector, - CFloat32ProjectionData2D* _pSinogram, - CFloat32VolumeData2D* _pReconstructionMask) -{ - // if already initialized, clear first - if (m_bIsInitialized) { - clear(); - } - - // required classes - m_pProjector = _pProjector; - m_pSinogram = _pSinogram; - m_pReconstructionMask = _pReconstructionMask; - - // init data objects and data projectors - _init(); - - // success - m_bIsInitialized = _check(); - return m_bIsInitialized; -} - -//--------------------------------------------------------------------------------------- -// Initialize Data Projectors - private -void CConvexHullAlgorithm::_init() -{ - // create data objects - m_pProjectionPixelWeight = new CFloat32VolumeData2D(m_pProjector->getVolumeGeometry()); - m_pProjectionPixelWeight->setData(0); - - // forward projection data projector - m_pDataProjector = dispatchDataProjector( - m_pProjector, - //SinogramMaskPolicy(m_pSinogramMask), // sinogram mask - TotalPixelWeightBySinogramPolicy(m_pSinogram, m_pProjectionPixelWeight) // pixel weight * sinogram - ); -} - -//--------------------------------------------------------------------------------------- -// Information - All -map<string,boost::any> CConvexHullAlgorithm::getInformation() -{ - map<string, boost::any> res; - return mergeMap<string,boost::any>(CAlgorithm::getInformation(), res); -}; - -//--------------------------------------------------------------------------------------- -// Information - Specific -boost::any CConvexHullAlgorithm::getInformation(std::string _sIdentifier) -{ - return CAlgorithm::getInformation(_sIdentifier); -}; - -//---------------------------------------------------------------------------------------- -// Iterate -void CConvexHullAlgorithm::run(int _iNrIterations) -{ - // check initialized - ASTRA_ASSERT(m_bIsInitialized); - - m_pReconstructionMask->setData(1.0f); - - // loop angles - for (int iProjection = 0; iProjection < m_pProjector->getProjectionGeometry()->getProjectionAngleCount(); ++iProjection) { - - m_pProjectionPixelWeight->setData(0.0f); - - // project - m_pDataProjector->projectSingleProjection(iProjection); - - // loop values and set to zero - for (int iPixel = 0; iPixel < m_pReconstructionMask->getSize(); ++iPixel) { - if (m_pProjectionPixelWeight->getData()[iPixel] == 0) { - m_pReconstructionMask->getData()[iPixel] = 0; - } - } - - } - -} -//---------------------------------------------------------------------------------------- - -} // namespace astra diff --git a/src/CudaDataOperationAlgorithm.cpp b/src/CudaDataOperationAlgorithm.cpp index aeb3f7a..f8bbd0b 100644 --- a/src/CudaDataOperationAlgorithm.cpp +++ b/src/CudaDataOperationAlgorithm.cpp @@ -30,7 +30,6 @@ $Id$ #include "astra/CudaDataOperationAlgorithm.h" -#include "../cuda/2d/dataop.h" #include "../cuda/2d/algo.h" #include "../cuda/2d/darthelper.h" #include "../cuda/2d/arith.h" |